Program index
- alignlinear (AIR automated
linear registration both within and across subjects)
- align_warp (AIR automated
nonlinear registration)
- binarize (converts 8 or 16 bit
file to a binary file)
- binarymask (applies a binary
mask to a file)
- binarymath (performs binary
operations on pairs of binary input files)
- cd_air (changes .air file's target
directory)
- cd_warp (changes .warp file's
target directory)
- combine_air (combines multiple
.air files)
- combine_warp (combines .air
and .warp files)
- crop (crops empty planes from images)
- definecommon_air (finds a
good common space for data analysis based on .air files)
- determinant_mask (creates a
mask where the determinant of a .warp file is positive)
- fixheader (corrects header file's
voxel sizes)
- fuse (joins 3D volumes at their edges)
- gsmooth (Gaussian smoothing)
- identify (computes hash value,
verifies header and image compatibility)
- invert_air (interconverts .air
file's reslice file and standard file)
- layout (creates 2D layout of 3D
data)
- magnify (magnifies images using
Fourier interpolation)
- makeaheader (creates new header
files)
- manualreslice (trial and
error registration, creates initialization files)
- mv_air (changes .air file's reslice
file)
- mv_warp (changes .warp file's
reslice file)
- overlay_mask (superimposes a mask file
onto a regular image file)
- reconcile_air (reconciles
discrepancies between a series of .air files defining all possible
pairwise registrations)
- reorient (rotates file 90 or 180
degrees or creates file's mirror image)
- resize (changes file's matrix size
and/or shifts file within matrix)
- reslice (reslices data based on
specified .air file)
- reslice_ucf (reslices point list using a
.air file)
- reslice_unwarp (reslices data
based on numerical inversion of specified .warp file)
- reslice_unwarp_ucf (reslices point list
based on numerical inversion of specified .warp file)
- reslice_vector (reslices data
based on specified vector field file)
- reslice_warp (reslices data
based on specified .warp file)
- reslice_warp_ucf (reslices point list
based on specified .warp file)
- reunite (joins multiple 2D files
into a single 3D file)
- scanair (displays contents of .air
file)
- scanheader (displays contents of
header file)
- scan_vector (displays contents of
.vector file)
- scan_warp (displays contents of
.warp file)
- separate (cuts a 3D volume into
multiple 2D files)
- setheadermax (changes header
file's maximum)
- sizeof (displays C variable sizes)
- softmean (averages files together
compensating for missing data)
- zoomer (interpolates file to cubic
voxels)
Modified: December 22, 2001
© 1995-2001 Roger P. Woods,
M.D.(rwoods@ucla.edu)