layout
This program will create a 2D layout using images sampled at regular intervals from a 3D
data set. This is especially useful for creating illustrations.
layout
input
orient(t/c/s)
width
height
z-start
z-step
output
[overwrite?(y/n)]
- where the following definitions apply:
-
- input
- the name of the input file
- orient(t/c/s)
-
- t=transverse sections of the input file
- c=coronal sections of the input file
- s=sagittal sections of the input file
- width
- the width (in images) of output
- height
- the height (in images) of output
- z-start
- the number of the first transverse, coronal or sagittal section that you
want displayed (section numbering starts at 1, not zero)
- z-step
- the number of sections to increment to find the next section of interest
(negative numbers are allowed)
- output
- the name of the output file
- overwrite?(y/n)
- 'y' grants permission to overwrite output
layout mri1 t 3 4 14 -1 mrilayout y
- A 3 image by 4 image mrilayout.img will be created showing planes 14 through 3 of
mri1.img (in descending order).
- If you run out of planes, the remaining spaces in the layout are filled with
zeros.
- Sections are not interpolated to cubic voxels
See also: Generic error messages
- ____ is not a valid choice for orientation
-
- 't', 'c', and 's' are the only allowed values
- height must be a positive integer
-
- provide an integer greater than or equal to 1
- width must be a positive integer
-
- provide an integer greater than or equal to 1
- z_start must be a positive integer
-
- provide an integer greater than or equal to 1
- z_step must be an integer
-
Modified: December 17, 2001
© 2001 Roger P. Woods, M.D.(rwoods@ucla.edu)